This study addresses the methodological dimension of the gap between social research and public policymaking in the Arab region. It demonstrates several intertwined factors that contributed to this phenomenon, the most important of which are: lack of trust between researchers and decision makers, methodological dependency, the absence of a scientific culture that promotes research based evaluation, the lack of intellectual and moral courage among researchers and weak demand for the use of multifaceted holistic approaches. The study concludes that the success of enhancing coordination between social science research and policymaking in the Arab region depends on the extent to which academic freedoms are respected, considering this constitutes one of the most important elements of scientific research and competency. Academia must also be allowed to fulfill its role in developing serious and applicable scientific research.